Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 TSPY25P-201ENST00000429463 745 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 AC026320.2-201ENST00000434379 478 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 AC026803.1-201ENST00000569130 274 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 LINC01783-202ENST00000614408 828 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 BX284668.2-205ENST00000619677 828 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 AC139712.1-201ENST00000378256 1875 ntBASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
RAB40ALP0C0E4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 CICP4-201ENST00000447359 2812 ntBASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RAB40ALP0C0E4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC006480.2-201ENST00000609770 1337 ntBASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC003686.1-201ENST00000550956 1034 ntBASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC092299.1-201ENST00000632679 757 ntBASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAB40ALP0C0E4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.69□□□□□ -0.22
RAB40ALP0C0E4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms