Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CAPN1P07384 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 MIR1202-201ENST00000408529 83 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 GOLGA2P4-201ENST00000441462 777 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN1P07384 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 AC131206.1-201ENST00000538078 1211 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN1P07384 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN1P07384 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 AC090505.1-201ENST00000430515 1834 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 AL138725.1-201ENST00000407347 1314 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 MRPL37P1-201ENST00000592451 1337 ntBASIC14.4□□□□□ -0.1
CAPN1P07384 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 AC010327.5-201ENST00000586923 3061 ntBASIC14.39□□□□□ -0.11
CAPN1P07384 AC020907.1-201ENST00000616460 1350 ntBASIC14.39□□□□□ -0.11
CAPN1P07384 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CAPN1P07384 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.39□□□□□ -0.11
CAPN1P07384 ZNF767P-206ENST00000513792 565 ntBASIC14.39□□□□□ -0.11
CAPN1P07384 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.39□□□□□ -0.11
CAPN1P07384 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.39□□□□□ -0.11
CAPN1P07384 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 ECM1P1-201ENST00000604092 1279 ntBASIC14.39□□□□□ -0.11
CAPN1P07384 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.39□□□□□ -0.11
CAPN1P07384 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CAPN1P07384 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPN1P07384 BEND3P1-201ENST00000421591 1944 ntBASIC14.39□□□□□ -0.11
CAPN1P07384 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPN1P07384 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPN1P07384 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 AC016397.2-201ENST00000624848 1985 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms