Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.31□□□□□ -0.44
PDCD6O75340 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.31□□□□□ -0.44
PDCD6O75340 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PDCD6O75340 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PDCD6O75340 TDH-203ENST00000531764 1110 ntBASIC12.31□□□□□ -0.44
PDCD6O75340 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PDCD6O75340 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.31□□□□□ -0.44
PDCD6O75340 MIR5189-201ENST00000577370 114 ntBASIC12.31□□□□□ -0.44
PDCD6O75340 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 AC104506.1-201ENST00000609247 429 ntBASIC12.31□□□□□ -0.44
PDCD6O75340 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.31□□□□□ -0.44
PDCD6O75340 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PDCD6O75340 AGAP10P-201ENST00000454844 2418 ntBASIC12.31□□□□□ -0.44
PDCD6O75340 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.31□□□□□ -0.44
PDCD6O75340 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.31□□□□□ -0.44
PDCD6O75340 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDCD6O75340 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PDCD6O75340 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.3□□□□□ -0.44
PDCD6O75340 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.3□□□□□ -0.44
PDCD6O75340 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 AC004945.1-201ENST00000416738 983 ntBASIC12.3□□□□□ -0.44
PDCD6O75340 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.3□□□□□ -0.44
PDCD6O75340 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.3□□□□□ -0.44
PDCD6O75340 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
PDCD6O75340 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 PCDHA5-203ENST00000614258 4248 ntBASIC12.3□□□□□ -0.44
PDCD6O75340 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PDCD6O75340 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDCD6O75340 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PDCD6O75340 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
PDCD6O75340 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PDCD6O75340 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.29□□□□□ -0.44
PDCD6O75340 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PDCD6O75340 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms