Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
OPHN1O60890 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
OPHN1O60890 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.29■□□□□ 0.04
OPHN1O60890 HOMER2P2-201ENST00000451621 847 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.29■□□□□ 0.04
OPHN1O60890 AP006547.1-201ENST00000563435 692 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 AC104982.3-201ENST00000581995 514 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.29■□□□□ 0.04
OPHN1O60890 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.29■□□□□ 0.04
OPHN1O60890 AC015967.2-201ENST00000624092 234 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 AC006435.4-201ENST00000625037 234 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 AL356737.1-201ENST00000634391 234 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 LINC01230-201ENST00000625222 3017 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.29■□□□□ 0.04
OPHN1O60890 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OPHN1O60890 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 AC006504.5-208ENST00000588784 2401 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OPHN1O60890 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 FNTAP2-201ENST00000430308 634 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 AC005077.2-201ENST00000449786 690 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
OPHN1O60890 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.28■□□□□ 0.04
OPHN1O60890 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 AC132938.4-201ENST00000623835 848 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OPHN1O60890 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.28■□□□□ 0.04
OPHN1O60890 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.28■□□□□ 0.04
OPHN1O60890 AL359183.1-201ENST00000623796 2132 ntBASIC15.28■□□□□ 0.04
OPHN1O60890 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OPHN1O60890 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 AL731571.1-201ENST00000617058 5428 ntBASIC15.27■□□□□ 0.04
OPHN1O60890 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms