Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.55■□□□□ 0.08
FOXN3O00409 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXN3O00409 HILS1-202ENST00000545329 423 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 MIR4259-201ENST00000584466 101 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.55■□□□□ 0.08
FOXN3O00409 AC244157.2-201ENST00000616239 1006 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 Z98259.2-201ENST00000641583 609 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
FOXN3O00409 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 AC023794.5-201ENST00000564380 2157 ntBASIC15.55■□□□□ 0.08
FOXN3O00409 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXN3O00409 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXN3O00409 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.54■□□□□ 0.08
FOXN3O00409 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
FOXN3O00409 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
FOXN3O00409 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXN3O00409 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 ST13P19-201ENST00000442505 1124 ntBASIC15.54■□□□□ 0.08
FOXN3O00409 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.54■□□□□ 0.08
FOXN3O00409 AC022210.1-201ENST00000449856 793 ntBASIC15.54■□□□□ 0.08
FOXN3O00409 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 AL162426.1-201ENST00000624141 743 ntBASIC15.54■□□□□ 0.08
FOXN3O00409 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
FOXN3O00409 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
FOXN3O00409 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.54■□□□□ 0.08
FOXN3O00409 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
FOXN3O00409 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
FOXN3O00409 AC067750.1-201ENST00000608826 6545 ntBASIC15.53■□□□□ 0.08
FOXN3O00409 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
FOXN3O00409 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms