Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRIT2A6NDA9 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ACTBP11-201ENST00000436287 1126 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC104306.2-201ENST00000451877 341 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 PFN1P12-201ENST00000455938 534 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC126915.1-201ENST00000522847 1038 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC021016.3-201ENST00000608367 477 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 GRK6P1-201ENST00000400595 1711 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 TUBB8P4-201ENST00000511806 1324 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 LAP3P2-201ENST00000454686 1454 ntBASIC13.8□□□□□ -0.2
LRIT2A6NDA9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LRIT2A6NDA9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LRIT2A6NDA9 DPM3-202ENST00000368399 517 ntBASIC13.79□□□□□ -0.2
LRIT2A6NDA9 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms