Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC162PA2VCL2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 CES1P1-201ENST00000421606 1704 ntBASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC162PA2VCL2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AL161932.2-201ENST00000435436 679 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AC009955.4-201ENST00000597192 544 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AC133552.6-201ENST00000613406 534 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 COX11-210ENST00000639671 696 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 AC064801.2-201ENST00000625052 1303 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC162PA2VCL2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 TMBIM7P-202ENST00000641474 1516 ntBASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AP005482.1-201ENST00000563722 1273 ntBASIC14.57□□□□□ -0.08
CCDC162PA2VCL2 AC005586.2-201ENST00000563946 837 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms