Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ABCD1P2-201ENST00000429313 1601 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 KRT8P28-201ENST00000433288 1390 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AL022323.5-201ENST00000624101 2059 ntBASIC12.67□□□□□ -0.38
SHISA3A0PJX4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 USP17L6P-201ENST00000382470 1197 ntBASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AC125807.1-201ENST00000483097 614 ntBASIC12.67□□□□□ -0.38
SHISA3A0PJX4 HLA-J-203ENST00000494367 1087 ntBASIC12.67□□□□□ -0.38
SHISA3A0PJX4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 INTS4P2-202ENST00000614726 2019 ntBASIC12.67□□□□□ -0.38
SHISA3A0PJX4 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SHISA3A0PJX4 MEX3B-202ENST00000558133 4333 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 BTBD7P1-201ENST00000447253 1453 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.66□□□□□ -0.38
SHISA3A0PJX4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SHISA3A0PJX4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms