Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LOC102724428A0A0B4J2F2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.12■□□□□ 0.49
LOC102724428A0A0B4J2F2 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 GEMIN8P4-201ENST00000380526 729 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC073210.1-201ENST00000414799 232 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC093300.1-201ENST00000510368 1201 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC023968.2-201ENST00000560593 1049 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AL136982.5-201ENST00000605222 294 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 MIR6074-201ENST00000612054 107 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 FKBP4P8-201ENST00000610931 1369 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC006486.2-201ENST00000624246 2199 ntBASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LOC102724428A0A0B4J2F2 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 FAM21EP-201ENST00000417804 985 ntBASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 RPL3P5-201ENST00000441645 1232 ntBASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 CASP16P-204ENST00000635032 809 ntBASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LOC102724428A0A0B4J2F2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms