Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC140113.1-201ENST00000603467 169 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC005041.3-201ENST00000606287 649 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC090386.2-201ENST00000623010 1039 ntBASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC187A0A096LP49 MIR600HG-201ENST00000449175 5984 ntBASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 AC006504.5-208ENST00000588784 2401 ntBASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC187A0A096LP49 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AC098934.1-203ENST00000442868 1262 ntBASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AC018638.5-201ENST00000450885 754 ntBASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AL109954.1-202ENST00000564051 2148 ntBASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC187A0A096LP49 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 AP002414.2-201ENST00000591780 3365 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ACE3P-201ENST00000423435 1973 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 PSMD4P1-201ENST00000433951 1109 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 AC007250.1-201ENST00000608934 338 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms