Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MEP1AP4-201ENST00000423244 1087 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC004967.1-201ENST00000453589 447 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 FO681548.1-201ENST00000455617 1132 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC004466.1-201ENST00000599515 1080 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MIR497HG-202ENST00000572453 3838 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 PCDHA5-203ENST00000614258 4248 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 AL590440.2-201ENST00000641973 1595 ntBASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
UBE2D4Q9Y2X8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 AC064801.2-201ENST00000625052 1303 ntBASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBE2D4Q9Y2X8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms