Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AL136309.1-201ENST00000403917 691 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 SLC25A47P1-201ENST00000531577 414 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC008825.2-201ENST00000603374 718 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC138951.2-201ENST00000623455 1161 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC006453.4-201ENST00000636949 1252 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 HSPA8P5-201ENST00000456928 2069 ntBASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NEUROD4Q9HD90 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 KRT43P-201ENST00000434019 910 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AL590640.2-201ENST00000457038 527 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC008735.3-201ENST00000596646 500 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC084346.2-201ENST00000607097 949 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC064801.2-201ENST00000625052 1303 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 AC005840.4-201ENST00000541242 2494 ntBASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NEUROD4Q9HD90 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NEUROD4Q9HD90 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms