Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 KLF2P2-201ENST00000416807 1039 ntBASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC009477.1-201ENST00000452936 217 ntBASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC004449.1-201ENST00000564240 433 ntBASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC120045.2-201ENST00000567334 178 ntBASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC015911.4-201ENST00000588022 1070 ntBASIC17.94■□□□□ 0.46
UPF2Q9HAU5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC17.94■□□□□ 0.46
UPF2Q9HAU5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AC139712.1-201ENST00000378256 1875 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AL356585.2-201ENST00000625078 2396 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AC134915.1-201ENST00000426461 574 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 GCOM2-201ENST00000509133 1104 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 SPDYE18-201ENST00000510091 1050 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 AL138725.1-201ENST00000407347 1314 ntBASIC17.93■□□□□ 0.46
UPF2Q9HAU5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UPF2Q9HAU5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
UPF2Q9HAU5 KHSRPP1-201ENST00000427983 1768 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms