Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC015909.5-201ENST00000624336 2266 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC073548.1-201ENST00000624088 1882 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 GCOM2-201ENST00000509133 1104 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC104596.2-201ENST00000512793 793 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 AP001160.2-201ENST00000596071 487 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 KRT8P35-201ENST00000483942 1338 ntBASIC12.55□□□□□ -0.4
NICN1Q9BSH3 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NICN1Q9BSH3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 SOCS2P1-201ENST00000417727 557 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 MEP1AP4-201ENST00000423244 1087 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 AL442647.2-201ENST00000429864 857 ntBASIC12.54□□□□□ -0.4
NICN1Q9BSH3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.54□□□□□ -0.4
NICN1Q9BSH3 METTL21AP1-201ENST00000438852 635 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms