Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC4Q92889 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC4Q92889 PPT1-213ENST00000641319 2388 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC4Q92889 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC4Q92889 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 AC139712.1-201ENST00000378256 1875 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
ERCC4Q92889 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 BCRP1-201ENST00000444246 691 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.57■□□□□ 0.24
ERCC4Q92889 AC022137.2-201ENST00000503482 481 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 AC103988.2-201ENST00000561804 725 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 AP001063.1-201ENST00000568332 529 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 RN7SL204P-201ENST00000582831 262 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 LINC02560-201ENST00000596379 459 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 AC145423.3-201ENST00000615987 467 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ERCC4Q92889 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 AL359183.1-201ENST00000623796 2132 ntBASIC16.57■□□□□ 0.24
ERCC4Q92889 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ERCC4Q92889 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.57■□□□□ 0.24
ERCC4Q92889 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ERCC4Q92889 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC4Q92889 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ERCC4Q92889 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.56■□□□□ 0.24
ERCC4Q92889 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.56■□□□□ 0.24
ERCC4Q92889 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
ERCC4Q92889 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.56■□□□□ 0.24
ERCC4Q92889 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.56■□□□□ 0.24
ERCC4Q92889 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
ERCC4Q92889 AP001002.3-201ENST00000623482 206 ntBASIC16.56■□□□□ 0.24
ERCC4Q92889 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 KHSRPP1-201ENST00000427983 1768 ntBASIC16.56■□□□□ 0.24
ERCC4Q92889 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC4Q92889 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ERCC4Q92889 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.56■□□□□ 0.24
ERCC4Q92889 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ERCC4Q92889 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ERCC4Q92889 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ERCC4Q92889 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.55■□□□□ 0.24
ERCC4Q92889 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms