Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AC016397.2-201ENST00000624848 1985 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 AL590440.2-201ENST00000641973 1595 ntBASIC15.24■□□□□ 0.03
TRAF3IP1Q8TDR0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AC020910.6-201ENST00000623084 1459 ntBASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 KRT90P-201ENST00000549264 1064 ntBASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 SORD2P-201ENST00000558556 1069 ntBASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 IGHV3-72-202ENST00000621503 303 ntBASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP1Q8TDR0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AL359881.3-201ENST00000602640 1721 ntBASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAF3IP1Q8TDR0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms