Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AL592309.1-201ENST00000443127 649 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 TIMM8BP1-201ENST00000452384 211 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 GATB-205ENST00000508611 605 ntTSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 ALG1L8P-201ENST00000533887 760 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AL079307.3-201ENST00000556114 283 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 SORD2P-201ENST00000558556 1069 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AL033527.5-202ENST00000641632 1098 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 AC060814.4-201ENST00000594169 2163 ntBASIC10.91□□□□□ -0.66
NUP35Q8NFH5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
NUP35Q8NFH5 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 USO1-201ENST00000264904 4135 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 TLE1P1-201ENST00000422965 589 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AC007969.1-201ENST00000433675 447 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 FAM58CP-201ENST00000435741 640 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 SERBP1P3-201ENST00000459980 809 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 GAPDHP40-201ENST00000505218 1006 ntBASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NUP35Q8NFH5 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms