Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 MIR4640-201ENST00000581824 90 ntBASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
CCDC168Q8NDH2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 TSPY26P-202ENST00000565928 3884 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 LINC01101-201ENST00000622953 1884 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 STK24P1-201ENST00000455035 1291 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 KRT8P2-201ENST00000556193 944 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 PRMT1P1-201ENST00000604252 1009 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 PCDHA14-201ENST00000506751 2298 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 RPL4P6-201ENST00000438116 1304 ntBASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.02□□□□□ -0.49
CCDC168Q8NDH2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 LINC00265-2P-201ENST00000413372 782 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ZNF877P-201ENST00000437614 612 ntBASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ISL1-203ENST00000511384 981 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ACY3-202ENST00000529256 933 ntTSL 3 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.01□□□□□ -0.49
CCDC168Q8NDH2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms