Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 RCC2P1-201ENST00000452257 1476 ntBASIC22.28■■□□□ 1.16
VPS8Q8N3P4 AL590824.1-201ENST00000403828 1349 ntBASIC22.28■■□□□ 1.16
VPS8Q8N3P4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 AP000356.3-201ENST00000382243 753 ntBASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 RN7SL788P-201ENST00000460504 316 ntBASIC22.28■■□□□ 1.16
VPS8Q8N3P4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 GOLGA8EP-201ENST00000530246 1959 ntBASIC22.28■■□□□ 1.16
VPS8Q8N3P4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VPS8Q8N3P4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 EEF1DP2-201ENST00000433698 843 ntBASIC22.27■■□□□ 1.16
VPS8Q8N3P4 ERP29P1-201ENST00000442902 706 ntBASIC22.27■■□□□ 1.16
VPS8Q8N3P4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 NPM1P43-201ENST00000558669 786 ntBASIC22.27■■□□□ 1.16
VPS8Q8N3P4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 AC006372.4-201ENST00000624122 1543 ntBASIC22.27■■□□□ 1.16
VPS8Q8N3P4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VPS8Q8N3P4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
VPS8Q8N3P4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC22.27■■□□□ 1.15
VPS8Q8N3P4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 FXNP2-201ENST00000411625 547 ntBASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AC078991.1-201ENST00000437297 610 ntBASIC22.26■■□□□ 1.15
VPS8Q8N3P4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AP001184.1-201ENST00000637936 376 ntBASIC22.26■■□□□ 1.15
VPS8Q8N3P4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AC026748.1-201ENST00000624349 3251 ntBASIC22.26■■□□□ 1.15
VPS8Q8N3P4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AC139749.1-202ENST00000617529 3139 ntBASIC22.26■■□□□ 1.15
VPS8Q8N3P4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
VPS8Q8N3P4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms