Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 RNVU1-8-201ENST00000364272 125 ntBASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 ACTG1P19-201ENST00000418987 1116 ntBASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 RN7SL396P-201ENST00000471086 295 ntBASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AC005740.1-201ENST00000515639 522 ntBASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AC025183.3-201ENST00000623526 1482 ntBASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPAS4Q8IUM7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AL139008.1-201ENST00000437894 228 ntBASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AC093909.3-201ENST00000504783 336 ntBASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 KRT8P2-201ENST00000556193 944 ntBASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 SNORD3B-1-201ENST00000577988 758 ntBASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS4Q8IUM7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms