Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 RN7SKP175-201ENST00000408472 289 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 HLA-K-203ENST00000430151 1046 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 AC012441.2-201ENST00000444843 739 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 RPL18AP3-201ENST00000462885 528 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 MBLAC2-202ENST00000514906 1936 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 FAM90A7P-201ENST00000382628 1395 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 FAM90A23P-201ENST00000400136 1395 ntBASIC15.48■□□□□ 0.07
RNF135Q8IUD6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF135Q8IUD6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC010141.1-201ENST00000411585 623 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC098799.1-201ENST00000504752 800 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 SCARNA21-201ENST00000517026 139 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 DGAT2L7P-201ENST00000602462 744 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 MIR6769A-201ENST00000617340 73 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC092299.1-201ENST00000632679 757 ntBASIC15.47■□□□□ 0.07
RNF135Q8IUD6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF135Q8IUD6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AC012508.2-201ENST00000567613 1472 ntBASIC15.46■□□□□ 0.07
RNF135Q8IUD6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AL360270.3-201ENST00000609118 1348 ntBASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AL008718.2-201ENST00000609206 1313 ntBASIC15.46■□□□□ 0.07
RNF135Q8IUD6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF135Q8IUD6 KLF2P1-201ENST00000447438 1042 ntBASIC15.46■□□□□ 0.07
RNF135Q8IUD6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms