Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC027237.1-201ENST00000560942 655 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC132192.2-201ENST00000596206 1147 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC090505.1-201ENST00000430515 1834 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 DMBT1P1-203ENST00000636837 4628 ntBASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 BTBD6P1-201ENST00000412176 1267 ntBASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 FAM58BP-201ENST00000439056 645 ntBASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AL008721.1-201ENST00000609964 604 ntBASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNE3Q6ZMZ3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AL354877.1-201ENST00000424412 413 ntBASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AL583810.1-201ENST00000553344 1045 ntBASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AC009955.4-201ENST00000597192 544 ntBASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AC009884.2-201ENST00000603110 324 ntBASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 MIR6720-201ENST00000611664 98 ntBASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNE3Q6ZMZ3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms