Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 TPRX2P-201ENST00000535362 881 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC135782.3-201ENST00000562782 2105 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC004449.1-201ENST00000564240 433 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC004466.1-201ENST00000599515 1080 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC004840.1-201ENST00000636359 365 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC064801.2-201ENST00000625052 1303 ntBASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC9.99□□□□□ -0.81
LINC00242Q5T6M2 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 F10-203ENST00000409306 1450 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AL590440.2-201ENST00000641973 1595 ntBASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
LINC00242Q5T6M2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms