Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 TBC1D3J-201ENST00000620719 1426 ntBASIC16.66■□□□□ 0.26
USH1GQ495M9 AC011498.7-201ENST00000624986 2027 ntBASIC16.66■□□□□ 0.26
USH1GQ495M9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
USH1GQ495M9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USH1GQ495M9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.65■□□□□ 0.26
USH1GQ495M9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.65■□□□□ 0.26
USH1GQ495M9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.65■□□□□ 0.26
USH1GQ495M9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 ELK2AP-201ENST00000392510 1007 ntBASIC16.65■□□□□ 0.26
USH1GQ495M9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.65■□□□□ 0.26
USH1GQ495M9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 CEP164P1-201ENST00000455142 418 ntBASIC16.65■□□□□ 0.26
USH1GQ495M9 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.65■□□□□ 0.26
USH1GQ495M9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 AC005586.2-201ENST00000563946 837 ntBASIC16.65■□□□□ 0.26
USH1GQ495M9 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.65■□□□□ 0.26
USH1GQ495M9 MIR6769A-201ENST00000617340 73 ntBASIC16.65■□□□□ 0.26
USH1GQ495M9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
USH1GQ495M9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
USH1GQ495M9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USH1GQ495M9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.65■□□□□ 0.26
USH1GQ495M9 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
USH1GQ495M9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
USH1GQ495M9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.64■□□□□ 0.26
USH1GQ495M9 CAP2P1-201ENST00000557743 1390 ntBASIC16.64■□□□□ 0.26
USH1GQ495M9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.64■□□□□ 0.26
USH1GQ495M9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
USH1GQ495M9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AP002353.1-201ENST00000528257 1599 ntBASIC16.64■□□□□ 0.25
USH1GQ495M9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
USH1GQ495M9 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.64■□□□□ 0.25
USH1GQ495M9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.64■□□□□ 0.25
USH1GQ495M9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
USH1GQ495M9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.64■□□□□ 0.25
USH1GQ495M9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.64■□□□□ 0.25
USH1GQ495M9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
USH1GQ495M9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms