Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ANKRD55Q3KP44 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ANKRD55Q3KP44 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ANKRD55Q3KP44 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
ANKRD55Q3KP44 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
ANKRD55Q3KP44 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.15□□□□□ -0.47
ANKRD55Q3KP44 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TLE1P1-201ENST00000422965 589 ntBASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 AC107373.2-201ENST00000607735 490 ntBASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TEX28P1-201ENST00000613479 1221 ntBASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TEX28P2-201ENST00000617764 1221 ntBASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 AL158212.4-201ENST00000624062 1286 ntBASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ANKRD55Q3KP44 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms