Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 AC069335.1-201ENST00000489972 472 ntBASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 MIR6069-201ENST00000620069 79 ntBASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 AC092902.6-201ENST00000641783 218 ntBASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PAM-203ENST00000346918 3302 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 AC010970.1-201ENST00000445125 1848 ntBASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ERCC6LQ2NKX8 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 AC018529.1-201ENST00000613063 361 ntBASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 MIR193BHG-211ENST00000641433 5365 ntBASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
ERCC6LQ2NKX8 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 AC110048.1-201ENST00000604293 2157 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 MRPL37P1-201ENST00000592451 1337 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 AC012531.1-201ENST00000562848 2680 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 GHET1-201ENST00000627071 1906 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 MIR574-201ENST00000385209 96 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 AC023274.1-201ENST00000418278 595 ntBASIC15.43■□□□□ 0.06
ERCC6LQ2NKX8 GAPDHP40-201ENST00000505218 1006 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms