Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPAQ06546 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABPAQ06546 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABPAQ06546 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 AC140479.7-201ENST00000636301 2332 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GABPAQ06546 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GABPAQ06546 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
GABPAQ06546 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GABPAQ06546 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GABPAQ06546 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.89■□□□□ 0.3
GABPAQ06546 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 AC067931.2-201ENST00000623655 2003 ntBASIC16.89■□□□□ 0.29
GABPAQ06546 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.89■□□□□ 0.29
GABPAQ06546 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.89■□□□□ 0.29
GABPAQ06546 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.89■□□□□ 0.29
GABPAQ06546 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.89■□□□□ 0.29
GABPAQ06546 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GABPAQ06546 AC232323.1-201ENST00000540724 2099 ntBASIC16.89■□□□□ 0.29
GABPAQ06546 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.89■□□□□ 0.29
GABPAQ06546 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GABPAQ06546 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 AC015802.1-201ENST00000588104 1449 ntBASIC16.88■□□□□ 0.29
GABPAQ06546 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
GABPAQ06546 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.88■□□□□ 0.29
GABPAQ06546 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.88■□□□□ 0.29
GABPAQ06546 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.88■□□□□ 0.29
GABPAQ06546 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.88■□□□□ 0.29
GABPAQ06546 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.88■□□□□ 0.29
GABPAQ06546 AP002803.1-201ENST00000528836 498 ntBASIC16.88■□□□□ 0.29
GABPAQ06546 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.88■□□□□ 0.29
GABPAQ06546 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.88■□□□□ 0.29
GABPAQ06546 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
GABPAQ06546 AC009145.4-201ENST00000625119 1294 ntBASIC16.88■□□□□ 0.29
GABPAQ06546 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GABPAQ06546 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.88■□□□□ 0.29
GABPAQ06546 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms