Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.69□□□□□ -0.38
UBA52P62987 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 AC018892.3-201ENST00000623986 2499 ntBASIC12.69□□□□□ -0.38
UBA52P62987 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
UBA52P62987 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
UBA52P62987 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBA52P62987 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
UBA52P62987 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 TUBB1P2-201ENST00000422712 1306 ntBASIC12.68□□□□□ -0.38
UBA52P62987 TUBB1P1-201ENST00000503144 1300 ntBASIC12.68□□□□□ -0.38
UBA52P62987 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 BEND3P3-201ENST00000611030 2440 ntBASIC12.68□□□□□ -0.38
UBA52P62987 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
UBA52P62987 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.68□□□□□ -0.38
UBA52P62987 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 MIR1908-201ENST00000410394 80 ntBASIC12.68□□□□□ -0.38
UBA52P62987 AC099336.1-201ENST00000417053 1171 ntBASIC12.68□□□□□ -0.38
UBA52P62987 FAM21FP-201ENST00000426241 1131 ntBASIC12.68□□□□□ -0.38
UBA52P62987 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 EEF1DP4-201ENST00000446006 880 ntBASIC12.68□□□□□ -0.38
UBA52P62987 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.68□□□□□ -0.38
UBA52P62987 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.68□□□□□ -0.38
UBA52P62987 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 AL359711.2-201ENST00000563105 872 ntBASIC12.68□□□□□ -0.38
UBA52P62987 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.68□□□□□ -0.38
UBA52P62987 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.68□□□□□ -0.38
UBA52P62987 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 AL691432.1-201ENST00000596308 1422 ntBASIC12.68□□□□□ -0.38
UBA52P62987 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.68□□□□□ -0.38
UBA52P62987 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.68□□□□□ -0.38
UBA52P62987 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
UBA52P62987 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBA52P62987 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
UBA52P62987 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.67□□□□□ -0.38
UBA52P62987 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.67□□□□□ -0.38
UBA52P62987 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.67□□□□□ -0.38
UBA52P62987 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBA52P62987 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms