Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.03□□□□□ -0.32
CLDN17P56750 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN17P56750 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CLDN17P56750 AC015818.8-201ENST00000587907 1519 ntBASIC13.03□□□□□ -0.32
CLDN17P56750 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.03□□□□□ -0.32
CLDN17P56750 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CLDN17P56750 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
CLDN17P56750 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN17P56750 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CLDN17P56750 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN17P56750 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN17P56750 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.02□□□□□ -0.32
CLDN17P56750 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN17P56750 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.02□□□□□ -0.32
CLDN17P56750 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN17P56750 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
CLDN17P56750 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CLDN17P56750 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CLDN17P56750 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN17P56750 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
CLDN17P56750 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 RPL13AP20-201ENST00000459725 609 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN17P56750 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN17P56750 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN17P56750 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN17P56750 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.02□□□□□ -0.33
CLDN17P56750 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.02□□□□□ -0.33
CLDN17P56750 AC009955.4-201ENST00000597192 544 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 AL359881.2-201ENST00000602973 570 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 MIR6720-201ENST00000611664 98 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.02□□□□□ -0.33
CLDN17P56750 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN17P56750 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN17P56750 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CLDN17P56750 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN17P56750 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 AC244394.1-201ENST00000435000 1665 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CLDN17P56750 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 AC104581.4-201ENST00000623126 3052 ntBASIC13.02□□□□□ -0.33
CLDN17P56750 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.02□□□□□ -0.33
CLDN17P56750 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CLDN17P56750 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CLDN17P56750 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN17P56750 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.01□□□□□ -0.33
CLDN17P56750 AL354877.1-201ENST00000424412 413 ntBASIC13.01□□□□□ -0.33
CLDN17P56750 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.01□□□□□ -0.33
CLDN17P56750 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 AL008721.1-201ENST00000609964 604 ntBASIC13.01□□□□□ -0.33
CLDN17P56750 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.01□□□□□ -0.33
CLDN17P56750 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.01□□□□□ -0.33
CLDN17P56750 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLDN17P56750 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms