Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A1P43005 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A1P43005 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC1A1P43005 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 SHC1P1-201ENST00000425230 1745 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 AGAP10P-201ENST00000454844 2418 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC1A1P43005 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 AC112492.5-201ENST00000421897 457 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC1A1P43005 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC1A1P43005 CHMP1AP1-201ENST00000445563 662 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 INE1-201ENST00000456273 945 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.23■□□□□ 0.03
SLC1A1P43005 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 C2orf69P2-201ENST00000562032 1123 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 BAP1-211ENST00000615113 489 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 AL591163.1-201ENST00000641757 987 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 AC126335.2-201ENST00000623362 4637 ntBASIC15.23■□□□□ 0.03
SLC1A1P43005 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.23■□□□□ 0.03
SLC1A1P43005 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.23■□□□□ 0.03
SLC1A1P43005 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SLC1A1P43005 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SLC1A1P43005 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.22■□□□□ 0.03
SLC1A1P43005 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC1A1P43005 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 RN7SL692P-201ENST00000464677 288 ntBASIC15.22■□□□□ 0.03
SLC1A1P43005 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC1A1P43005 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC1A1P43005 AL136301.1-201ENST00000615830 422 ntBASIC15.22■□□□□ 0.03
SLC1A1P43005 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC1A1P43005 AL358472.5-202ENST00000641448 1267 ntBASIC15.22■□□□□ 0.03
SLC1A1P43005 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SLC1A1P43005 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC1A1P43005 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms