Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL15A1P39059 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.14■□□□□ 0.5
COL15A1P39059 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL15A1P39059 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
COL15A1P39059 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.14■□□□□ 0.49
COL15A1P39059 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COL15A1P39059 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
COL15A1P39059 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL15A1P39059 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.14■□□□□ 0.49
COL15A1P39059 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
COL15A1P39059 KLF17P1-201ENST00000547105 1126 ntBASIC18.14■□□□□ 0.49
COL15A1P39059 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC18.14■□□□□ 0.49
COL15A1P39059 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC18.14■□□□□ 0.49
COL15A1P39059 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL15A1P39059 AC015802.1-201ENST00000588104 1449 ntBASIC18.14■□□□□ 0.49
COL15A1P39059 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL15A1P39059 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.13■□□□□ 0.49
COL15A1P39059 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.13■□□□□ 0.49
COL15A1P39059 ACTG1P19-201ENST00000418987 1116 ntBASIC18.13■□□□□ 0.49
COL15A1P39059 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.13■□□□□ 0.49
COL15A1P39059 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 AL118516.1-201ENST00000564152 670 ntBASIC18.13■□□□□ 0.49
COL15A1P39059 AC010976.2-201ENST00000609697 852 ntBASIC18.13■□□□□ 0.49
COL15A1P39059 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.13■□□□□ 0.49
COL15A1P39059 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.13■□□□□ 0.49
COL15A1P39059 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL15A1P39059 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL15A1P39059 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COL15A1P39059 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.12■□□□□ 0.49
COL15A1P39059 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL15A1P39059 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.12■□□□□ 0.49
COL15A1P39059 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.12■□□□□ 0.49
COL15A1P39059 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL15A1P39059 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
COL15A1P39059 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A21P-201ENST00000510875 1396 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms