Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AHCYP2-201ENST00000430630 1300 ntBASIC12.5□□□□□ -0.41
CCL1P22362 AL008718.2-201ENST00000609206 1313 ntBASIC12.5□□□□□ -0.41
CCL1P22362 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 CICP17-201ENST00000418553 2377 ntBASIC12.5□□□□□ -0.41
CCL1P22362 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
CCL1P22362 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCL1P22362 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCL1P22362 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCL1P22362 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL1P22362 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 MARK2P9-201ENST00000430958 1727 ntBASIC12.49□□□□□ -0.41
CCL1P22362 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL1P22362 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 CU639417.3-201ENST00000624240 1404 ntBASIC12.49□□□□□ -0.41
CCL1P22362 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL1P22362 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL1P22362 MIR1202-201ENST00000408529 83 ntBASIC12.49□□□□□ -0.41
CCL1P22362 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL1P22362 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL1P22362 HIST2H2BB-201ENST00000449108 381 ntBASIC12.49□□□□□ -0.41
CCL1P22362 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.49□□□□□ -0.41
CCL1P22362 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 AP000812.2-201ENST00000538934 718 ntBASIC12.49□□□□□ -0.41
CCL1P22362 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL1P22362 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL1P22362 AC021016.3-201ENST00000608367 477 ntBASIC12.49□□□□□ -0.41
CCL1P22362 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.49□□□□□ -0.41
CCL1P22362 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 RHOXF1P1-202ENST00000635473 501 ntBASIC12.49□□□□□ -0.41
CCL1P22362 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCL1P22362 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.49□□□□□ -0.41
CCL1P22362 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
CCL1P22362 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCL1P22362 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCL1P22362 PDIA3P1-201ENST00000471856 1510 ntBASIC12.48□□□□□ -0.41
CCL1P22362 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCL1P22362 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.48□□□□□ -0.41
CCL1P22362 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms