Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.74□□□□□ -0.05
VCLP18206 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
VCLP18206 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VCLP18206 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.73□□□□□ -0.05
VCLP18206 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VCLP18206 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VCLP18206 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.73□□□□□ -0.05
VCLP18206 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.73□□□□□ -0.05
VCLP18206 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.73□□□□□ -0.05
VCLP18206 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 AC106820.3-201ENST00000561653 397 ntBASIC14.73□□□□□ -0.05
VCLP18206 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.73□□□□□ -0.05
VCLP18206 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.73□□□□□ -0.05
VCLP18206 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 CR383656.2-201ENST00000548656 2254 ntBASIC14.73□□□□□ -0.05
VCLP18206 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VCLP18206 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.73□□□□□ -0.05
VCLP18206 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
VCLP18206 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 TUBB1P2-201ENST00000422712 1306 ntBASIC14.72□□□□□ -0.05
VCLP18206 TUBB1P1-201ENST00000503144 1300 ntBASIC14.72□□□□□ -0.05
VCLP18206 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.72□□□□□ -0.05
VCLP18206 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.72□□□□□ -0.05
VCLP18206 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.72□□□□□ -0.05
VCLP18206 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.72□□□□□ -0.05
VCLP18206 AL355994.2-201ENST00000447882 704 ntBASIC14.72□□□□□ -0.05
VCLP18206 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.72□□□□□ -0.05
VCLP18206 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.72□□□□□ -0.05
VCLP18206 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VCLP18206 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
VCLP18206 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms