Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PPP3CBP16298 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.18□□□□□ -0.3
PPP3CBP16298 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PPP3CBP16298 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PPP3CBP16298 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
PPP3CBP16298 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PPP3CBP16298 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
PPP3CBP16298 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.18□□□□□ -0.3
PPP3CBP16298 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PPP3CBP16298 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PPP3CBP16298 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.17□□□□□ -0.3
PPP3CBP16298 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 AL023775.1-201ENST00000454907 1746 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.17□□□□□ -0.3
PPP3CBP16298 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PPP3CBP16298 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
PPP3CBP16298 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 MIR663B-201ENST00000408361 115 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.17□□□□□ -0.3
PPP3CBP16298 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.17□□□□□ -0.3
PPP3CBP16298 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC091804.1-201ENST00000486888 567 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.17□□□□□ -0.3
PPP3CBP16298 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
PPP3CBP16298 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC106820.3-201ENST00000561653 397 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC005695.3-201ENST00000614522 232 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
PPP3CBP16298 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
PPP3CBP16298 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 AC089987.1-201ENST00000551654 2209 ntBASIC13.17□□□□□ -0.3
PPP3CBP16298 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PPP3CBP16298 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PPP3CBP16298 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.16□□□□□ -0.3
PPP3CBP16298 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
PPP3CBP16298 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.16□□□□□ -0.3
PPP3CBP16298 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.16□□□□□ -0.3
PPP3CBP16298 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.16□□□□□ -0.3
PPP3CBP16298 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.16□□□□□ -0.3
PPP3CBP16298 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PPP3CBP16298 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms