Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 MEP1AP4-201ENST00000423244 1087 ntBASIC16.13■□□□□ 0.17
TPM1P09493 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM1P09493 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM1P09493 SPDYE18-201ENST00000510091 1050 ntBASIC16.13■□□□□ 0.17
TPM1P09493 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.13■□□□□ 0.17
TPM1P09493 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.13■□□□□ 0.17
TPM1P09493 AC120045.2-201ENST00000567334 178 ntBASIC16.13■□□□□ 0.17
TPM1P09493 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM1P09493 SPDYE22P-201ENST00000582158 798 ntBASIC16.13■□□□□ 0.17
TPM1P09493 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.13■□□□□ 0.17
TPM1P09493 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM1P09493 AC079781.4-201ENST00000641908 219 ntBASIC16.13■□□□□ 0.17
TPM1P09493 AL805961.2-201ENST00000642139 4817 ntBASIC16.13■□□□□ 0.17
TPM1P09493 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 AL023775.1-201ENST00000454907 1746 ntBASIC16.13■□□□□ 0.17
TPM1P09493 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TPM1P09493 TP73-203ENST00000357733 4899 ntTSL 5 BASIC16.13■□□□□ 0.17
TPM1P09493 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TPM1P09493 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.13■□□□□ 0.17
TPM1P09493 AC114271.1-201ENST00000612689 2813 ntBASIC16.13■□□□□ 0.17
TPM1P09493 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TPM1P09493 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM1P09493 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM1P09493 C1QBPP1-201ENST00000400117 770 ntBASIC16.12■□□□□ 0.17
TPM1P09493 MIR943-201ENST00000401286 94 ntBASIC16.12■□□□□ 0.17
TPM1P09493 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.12■□□□□ 0.17
TPM1P09493 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM1P09493 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.12■□□□□ 0.17
TPM1P09493 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.12■□□□□ 0.17
TPM1P09493 AC104596.2-201ENST00000512793 793 ntBASIC16.12■□□□□ 0.17
TPM1P09493 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 AC131206.1-201ENST00000538078 1211 ntBASIC16.12■□□□□ 0.17
TPM1P09493 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 RRP7BP-205ENST00000566851 833 ntBASIC16.12■□□□□ 0.17
TPM1P09493 AC009407.1-201ENST00000568958 598 ntBASIC16.12■□□□□ 0.17
TPM1P09493 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TPM1P09493 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TPM1P09493 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.12■□□□□ 0.17
TPM1P09493 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TPM1P09493 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC16.12■□□□□ 0.17
TPM1P09493 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TPM1P09493 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TPM1P09493 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TPM1P09493 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM1P09493 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.11■□□□□ 0.17
TPM1P09493 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.11■□□□□ 0.17
TPM1P09493 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM1P09493 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TPM1P09493 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TPM1P09493 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TPM1P09493 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TPM1P09493 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM1P09493 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TPM1P09493 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TPM1P09493 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms