Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 U62317.3-201ENST00000608319 855 ntBASIC17.05■□□□□ 0.32
HLA-DOAP06340 AC009560.1-201ENST00000620208 434 ntBASIC17.05■□□□□ 0.32
HLA-DOAP06340 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC064801.2-201ENST00000625052 1303 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC073869.2-201ENST00000417338 1026 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC130709.1-201ENST00000484779 1212 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 NDUFS6P1-201ENST00000485187 316 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC087392.5-201ENST00000612517 489 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 AC011491.1-203ENST00000637688 543 ntBASIC17.04■□□□□ 0.32
HLA-DOAP06340 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DOAP06340 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DOAP06340 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 RN7SL81P-201ENST00000493781 261 ntBASIC17.03■□□□□ 0.32
HLA-DOAP06340 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 RN7SL555P-201ENST00000584742 339 ntBASIC17.03■□□□□ 0.32
HLA-DOAP06340 AC087045.2-201ENST00000606279 1003 ntBASIC17.03■□□□□ 0.32
HLA-DOAP06340 AC007881.3-201ENST00000608897 607 ntBASIC17.03■□□□□ 0.32
HLA-DOAP06340 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DOAP06340 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DOAP06340 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms