Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.4■□□□□ 0.06
TIMP1P01033 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 AC117503.4-201ENST00000623229 1418 ntBASIC15.4■□□□□ 0.06
TIMP1P01033 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TIMP1P01033 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 AC064801.2-201ENST00000625052 1303 ntBASIC15.4■□□□□ 0.06
TIMP1P01033 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TIMP1P01033 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TIMP1P01033 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.4■□□□□ 0.06
TIMP1P01033 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TIMP1P01033 AC068587.6-202ENST00000641839 5619 ntBASIC15.39■□□□□ 0.05
TIMP1P01033 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TIMP1P01033 CDCA4P4-201ENST00000435216 680 ntBASIC15.39■□□□□ 0.05
TIMP1P01033 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.39■□□□□ 0.05
TIMP1P01033 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.39■□□□□ 0.05
TIMP1P01033 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 AC004801.1-201ENST00000549557 360 ntBASIC15.39■□□□□ 0.05
TIMP1P01033 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.39■□□□□ 0.05
TIMP1P01033 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.39■□□□□ 0.05
TIMP1P01033 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TIMP1P01033 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TIMP1P01033 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TIMP1P01033 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 SIRPB3P-201ENST00000340424 1216 ntBASIC15.38■□□□□ 0.05
TIMP1P01033 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TIMP1P01033 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TIMP1P01033 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TIMP1P01033 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.38■□□□□ 0.05
TIMP1P01033 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms