Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RFPL1O75677 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RFPL1O75677 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.64□□□□□ -0.07
RFPL1O75677 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.64□□□□□ -0.07
RFPL1O75677 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.64□□□□□ -0.07
RFPL1O75677 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.64□□□□□ -0.07
RFPL1O75677 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.64□□□□□ -0.07
RFPL1O75677 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RFPL1O75677 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFPL1O75677 AC020907.1-201ENST00000616460 1350 ntBASIC14.63□□□□□ -0.07
RFPL1O75677 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFPL1O75677 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.63□□□□□ -0.07
RFPL1O75677 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.63□□□□□ -0.07
RFPL1O75677 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.63□□□□□ -0.07
RFPL1O75677 AP001889.1-201ENST00000525414 633 ntBASIC14.63□□□□□ -0.07
RFPL1O75677 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RFPL1O75677 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.63□□□□□ -0.07
RFPL1O75677 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RFPL1O75677 COL6A4P2-202ENST00000504443 2753 ntBASIC14.63□□□□□ -0.07
RFPL1O75677 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RFPL1O75677 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.63□□□□□ -0.07
RFPL1O75677 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.63□□□□□ -0.07
RFPL1O75677 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.63□□□□□ -0.07
RFPL1O75677 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RFPL1O75677 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.62□□□□□ -0.07
RFPL1O75677 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.62□□□□□ -0.07
RFPL1O75677 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.62□□□□□ -0.07
RFPL1O75677 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
RFPL1O75677 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RFPL1O75677 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms