Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 MIR663B-201ENST00000408361 115 ntBASIC12.06□□□□□ -0.48
A0A1W2PRF3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TLE1P1-201ENST00000422965 589 ntBASIC12.06□□□□□ -0.48
A0A1W2PRF3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 AP001258.2-201ENST00000529891 490 ntBASIC12.06□□□□□ -0.48
A0A1W2PRF3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 AL451050.2-201ENST00000606967 682 ntBASIC12.06□□□□□ -0.48
A0A1W2PRF3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 FGD5P1-202ENST00000614866 2498 ntBASIC12.06□□□□□ -0.48
A0A1W2PRF3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 MIR1247-201ENST00000408206 136 ntBASIC12.05□□□□□ -0.48
A0A1W2PRF3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 AC006033.1-201ENST00000440505 426 ntBASIC12.05□□□□□ -0.48
A0A1W2PRF3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 ZNF767P-206ENST00000513792 565 ntBASIC12.05□□□□□ -0.48
A0A1W2PRF3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 MIR6787-201ENST00000616675 61 ntBASIC12.05□□□□□ -0.48
A0A1W2PRF3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
A0A1W2PRF3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 AC020907.1-201ENST00000616460 1350 ntBASIC12.05□□□□□ -0.48
A0A1W2PRF3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
A0A1W2PRF3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
A0A1W2PRF3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.04□□□□□ -0.48
A0A1W2PRF3 AC092135.3-201ENST00000624151 1846 ntBASIC12.04□□□□□ -0.48
A0A1W2PRF3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.04□□□□□ -0.48
A0A1W2PRF3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
A0A1W2PRF3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
A0A1W2PRF3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
A0A1W2PRF3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
A0A1W2PRF3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms