Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 SAMD11P1-201ENST00000571429 661 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AP002414.4-201ENST00000589764 1148 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC124319.4-201ENST00000622931 2161 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 BX537318.2-201ENST00000624893 4162 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 AC026992.2-203ENST00000563004 2419 ntBASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRAPPC1Q9Y5R8 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AC092117.1-201ENST00000621230 3250 ntBASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AC092028.1-202ENST00000641483 3547 ntBASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AC092028.1-201ENST00000641781 3540 ntBASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AP000867.3-201ENST00000524675 377 ntBASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TRAPPC1Q9Y5R8 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TRAPPC1Q9Y5R8 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TRAPPC1Q9Y5R8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TRAPPC1Q9Y5R8 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms