Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 PUDPP3-201ENST00000445368 636 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 ALG3P1-201ENST00000508806 1114 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC132192.2-201ENST00000596206 1147 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AC126335.2-201ENST00000623362 4637 ntBASIC14.57□□□□□ -0.08
SPASTQ9UBP0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SPASTQ9UBP0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CICP4-201ENST00000447359 2812 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 RPL18P13-201ENST00000478088 569 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AC009884.2-201ENST00000603110 324 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AC015967.2-201ENST00000624092 234 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AC006435.4-201ENST00000625037 234 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AL356737.1-201ENST00000634391 234 ntBASIC14.56□□□□□ -0.08
SPASTQ9UBP0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SPASTQ9UBP0 CICP14-201ENST00000629111 2732 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms