Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 PDIA3P2-201ENST00000428073 158 ntBASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AC234782.1-201ENST00000451950 919 ntBASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AC136759.1-202ENST00000530858 2194 ntBASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 AP000346.4-201ENST00000614827 381 ntBASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.49■□□□□ 0.23
HDAC6Q9UBN7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC116345.2-201ENST00000512837 523 ntBASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC090857.1-201ENST00000527400 390 ntBASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 NAP1L6-202ENST00000641404 1222 ntBASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AC113367.3-201ENST00000508316 1912 ntBASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HDAC6Q9UBN7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms