Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 IQSEC3P1-201ENST00000538799 536 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AC093752.3-201ENST00000567343 901 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AC018635.2-201ENST00000608625 364 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 AC074138.1-201ENST00000611182 1303 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 FGD5P1-202ENST00000614866 2498 ntBASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LRIT1Q9P2V4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC106881.1-201ENST00000605849 3329 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 DUTP3-201ENST00000450025 415 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 RN7SL181P-201ENST00000462921 277 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 SIGLEC18P-201ENST00000602271 909 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC007326.1-201ENST00000604539 458 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AL022334.2-201ENST00000610000 484 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 MIR6727-201ENST00000620702 65 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AL591471.1-201ENST00000621855 229 ntBASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRIT1Q9P2V4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT1Q9P2V4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT1Q9P2V4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT1Q9P2V4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT1Q9P2V4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRIT1Q9P2V4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms