Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.52□□□□□ -0.41
COMMD9Q9P000 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
COMMD9Q9P000 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.52□□□□□ -0.41
COMMD9Q9P000 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 MIR3687-2-201ENST00000577708 61 ntBASIC12.51□□□□□ -0.41
COMMD9Q9P000 MIR4453-201ENST00000584019 89 ntBASIC12.51□□□□□ -0.41
COMMD9Q9P000 AC025181.2-201ENST00000606994 802 ntBASIC12.51□□□□□ -0.41
COMMD9Q9P000 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 MIR3687-1-201ENST00000614492 61 ntBASIC12.51□□□□□ -0.41
COMMD9Q9P000 LINC00628-201ENST00000628516 1289 ntBASIC12.51□□□□□ -0.41
COMMD9Q9P000 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
COMMD9Q9P000 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COMMD9Q9P000 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 CICP16-201ENST00000502609 2813 ntBASIC12.5□□□□□ -0.41
COMMD9Q9P000 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COMMD9Q9P000 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COMMD9Q9P000 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms