Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 USP17L6P-201ENST00000382470 1197 ntBASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AC092580.1-201ENST00000433998 658 ntBASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AC090164.2-201ENST00000611487 516 ntBASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AL008638.5-201ENST00000623814 1298 ntBASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 CCT8L1P-201ENST00000465400 1674 ntBASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AGAP10P-201ENST00000454844 2418 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AC104306.2-201ENST00000451877 341 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SERPINA13P-202ENST00000478994 924 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 BAP1-211ENST00000615113 489 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AHCYP4-201ENST00000419201 1315 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 AP002353.1-201ENST00000528257 1599 ntBASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
BLOC1S4Q9NUP1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
BLOC1S4Q9NUP1 BEND3P1-201ENST00000421591 1944 ntBASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BLOC1S4Q9NUP1 AC078875.1-201ENST00000431907 724 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms