Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 CCND3P2-201ENST00000579393 537 ntBASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 PRR20FP-201ENST00000603320 180 ntBASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 AC004466.2-201ENST00000614749 516 ntBASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 AL139424.3-202ENST00000641619 917 ntBASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.79■□□□□ 0.6
TRPM3Q9HCF6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC089987.1-201ENST00000551654 2209 ntBASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC010086.2-201ENST00000428616 226 ntBASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC092910.2-201ENST00000491262 348 ntBASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 RPSAP70-201ENST00000504462 864 ntBASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC132812.1-201ENST00000583145 892 ntBASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRPM3Q9HCF6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 AIG1-203ENST00000367596 559 ntTSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 AC099328.1-201ENST00000498809 1030 ntBASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRPM3Q9HCF6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 MIR611-201ENST00000384869 67 ntBASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 RN7SL524P-201ENST00000581152 300 ntBASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRPM3Q9HCF6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 AC041040.1-201ENST00000425197 460 ntBASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.76■□□□□ 0.59
TRPM3Q9HCF6 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms