Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC022210.1-201ENST00000449856 793 ntBASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC073413.1-201ENST00000603927 732 ntBASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC138951.2-201ENST00000623455 1161 ntBASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 AC090643.2-201ENST00000623442 2029 ntBASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 BTNL10-201ENST00000595971 695 ntBASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UPF3BQ9BZI7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 AC007326.2-201ENST00000624224 7579 ntBASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 KRT90P-201ENST00000549264 1064 ntBASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 AL022328.1-201ENST00000610050 478 ntBASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UPF3BQ9BZI7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms