Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RSPO3Q9BXY4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AL023775.1-201ENST00000454907 1746 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 USP17L6P-201ENST00000382470 1197 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 SNX29P1-201ENST00000548357 1007 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC027307.3-201ENST00000594262 1100 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 MIR6720-201ENST00000611664 98 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC063926.2-201ENST00000623766 1308 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 AC114271.1-201ENST00000612689 2813 ntBASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RSPO3Q9BXY4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC079776.1-201ENST00000401540 1152 ntBASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC003686.1-201ENST00000550956 1034 ntBASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.29□□□□□ -0.28
RSPO3Q9BXY4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms