Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CALR4P-201ENST00000431943 946 ntBASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 NKAIN1P1-201ENST00000435754 582 ntBASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 MIR4783-201ENST00000580343 82 ntBASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AC022748.3-201ENST00000621828 275 ntBASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC013726.1-201ENST00000563747 2285 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 FNTAP2-201ENST00000430308 634 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC011742.3-201ENST00000439053 820 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 BX284668.4-201ENST00000453917 508 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC005324.6-201ENST00000587972 613 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC008805.1-201ENST00000590892 364 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 NDUFV2P1-201ENST00000596415 907 ntBASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.21□□□□□ -0.45
SSBP3Q9BWW4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SSBP3Q9BWW4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms