Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 TPT1P9-201ENST00000413759 514 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 KRT18P33-201ENST00000398525 1043 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 AC073210.1-201ENST00000414799 232 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC12.36□□□□□ -0.43
COL12A1Q99715 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 AC099343.1-201ENST00000513481 609 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 AC010335.3-201ENST00000623767 531 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.36□□□□□ -0.43
COL12A1Q99715 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 AC073869.1-201ENST00000415574 2762 ntBASIC12.35□□□□□ -0.43
COL12A1Q99715 RHOC-205ENST00000369636 786 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC12.35□□□□□ -0.43
COL12A1Q99715 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
COL12A1Q99715 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 HNRNPA3P6-201ENST00000472163 1006 ntBASIC12.35□□□□□ -0.43
COL12A1Q99715 PRSS3P1-201ENST00000503996 742 ntBASIC12.35□□□□□ -0.43
COL12A1Q99715 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC12.35□□□□□ -0.43
COL12A1Q99715 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.35□□□□□ -0.43
COL12A1Q99715 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
COL12A1Q99715 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.35□□□□□ -0.43
COL12A1Q99715 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.35□□□□□ -0.43
COL12A1Q99715 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
COL12A1Q99715 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COL12A1Q99715 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms